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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
BLCA rs1383916 chr8:26825245 A/G DCTN6 chr8:30013813-30041156:+ 0.52 6.27 9.99E-10 Box Plot
BLCA rs138435986 chr7:140165369 TACTAG/T LOC441455 chr9:99488103-99489749:+ 0.49 6.03 3.77E-9 Box Plot
BLCA rs138549714 chr18:3220755 G/GT PSMC4 chr19:40476912-40487348:+ 0.68 6.19 1.57E-9 Box Plot
BLCA rs138887541 chr6:28216427 A/AGAAACCTGTC ZFP57 chr6:29640169-29648887:- 0.74 6.8 3.98E-11 Box Plot
BLCA rs1390061 chr8:15276092 C/T AGPAT5 chr8:6565878-6617187:+ -0.65 -6.43 3.91E-10 Box Plot
BLCA rs1390061 chr8:15276092 C/T ASAH1 chr8:17913501-17942507:- -0.44 -6.05 3.51E-9 Box Plot
BLCA rs1390061 chr8:15276092 C/T BIN3 chr8:22477931-22526661:- -0.62 -6.47 2.93E-10 Box Plot
BLCA rs1390061 chr8:15276092 C/T CCDC25 chr8:27590828-27630170:- -0.72 -6.72 6.51E-11 Box Plot
BLCA rs1390061 chr8:15276092 C/T CHMP7 chr8:23101150-23119513:+ -0.77 -7.83 4.96E-14 Box Plot
BLCA rs1390061 chr8:15276092 C/T CLN8 chr8:1703944-1749877:+ -0.75 -6.88 2.48E-11 Box Plot
BLCA rs1390061 chr8:15276092 C/T CNOT7 chr8:17082473-17104387:- -0.83 -8.27 2.28E-15 Box Plot
BLCA rs1390061 chr8:15276092 C/T DCTN6 chr8:30013813-30041156:+ -0.67 -6.43 3.71E-10 Box Plot
BLCA rs1390061 chr8:15276092 C/T ENTPD4 chr8:23243296-23315208:- -0.53 -5.98 5.0E-9 Box Plot
BLCA rs1390061 chr8:15276092 C/T ERICH1 chr8:564746-688106:- -0.73 -6.21 1.42E-9 Box Plot
BLCA rs1390061 chr8:15276092 C/T FAM160B2 chr8:21946670-21962409:+ -0.68 -7.71 1.06E-13 Box Plot